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NIM nanosystems initiative munich
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Publications supported by NIM

Quantifying the Precision of Single-Molecule Torque and Twist Measurements Using Allan Variance

Authors: Maarten M. van Oene†, Seungkyu Ha†, Tessa Jager, Mina Lee, Francesco Pedaci, Jan Lipfert*, and Nynke H. Dekker*

Areas: 4

Magazine: Biophys. J. 114:1970–1979 (2018)

Temperature-dependent atomic models of detergent micelles refined against small-angle X-ray scattering data

Authors: Miloš T. Ivanović, Linda K. Bruetzel, Jan Lipfert*, and Jochen S. Hub*

Areas: 4

Magazine: Angewandte Chemie 57 (2018)

Structural architecture of the nucleosome remodeler ISWI determined from cross-linking, mass spectrometry, SAXS and modeling

Authors: Nadine Harrer†, Christina E.M. Schindler†, Linda K. Bruetzel, Ignasi Forné, Johanna Ludwigsen, Axel Imhof, Martin Zacharias, Jan Lipfert*, Felix Mueller-Planitz*

Areas: 4

Magazine: Structure 26:1-13 (2018)

Stretching and heating single DNA molecules with optically trapped gold-silica Janus particles

Authors: Sabrina Simoncelli*, Samuel Johnson, Franziska Kriegel, Jan Lipfert*, and Jochen Feldmann

Areas: 4

Magazine: ACS Photonics 4:2843–2851

Twist-Bend Coupling and the Torsional Response of Double-Stranded DNA

Authors: Stefanos K. Nomidis, Franziska Kriegel, Willem Vanderlinden, Jan Lipfert, and Enrico Carlon

Areas: 4

Magazine: Phys. Rev. Lett. 118:2178011-6 (2017)

Quantitative Evaluation of Statistical Errors in Small-Angle X-Ray Scattering Measurements

Authors: Steffen M. Sedlak, Linda K. Bruetzel, and Jan Lipfert

Areas: 4

Magazine: J. Appl.Cryst. 50:621–630 (2017)

Applying torque to the Escherichia coli flagellar motor using magnetic tweezers

Authors: Maarten M. van Oene, Laura E. Dickinson, Bronwen Cross, Francesco Pedaci, Jan Lipfert, and Nynke H. Dekker

Areas: 4

Magazine: Scientific Reports 7:43285 (2017)

DNA Origami Templated Silica Growth by Sol‐gel Chemistry

Authors: L. Nguyen, M. Döblinger, T. Liedl A. Heuer-Jungemann

Areas: 4, 5

Magazine: Angewandte Chemie International Edition, 58, 3, 2018

Circular Dichroism of Chiral Molecules in DNA-Assembled Plasmonic Hotspots

Authors: L. M. Kneer, E.-M. Roller, L. V. Besteiro, R. Schreiber, A. O. Govorov, T. Liedl

Areas: 4, 5

Magazine: ACS Nano, 2018, 12, 9, 9110-9115

3D DNA Origami Crystals

Authors: T. Zhang, C. Hartl, K. Frank, A. Heuer-Jungemann, S. Fischer, P. C. Nickels, B. Nickel, T. Liedl

Areas: 4, 5

Magazine: Advanced Materials, 30, 28, 2018

Position Accuracy of Gold Nanoparticles on DNA Origami Structures Studied with Small-Angle X-ray Scattering  

Authors: C. Hartl, K. Frank, H. Amenitsch, S. Fischer, T. Liedl, B. Nickel

Areas: 4, 5

Magazine: Nano Lett, 2018, 18, 4, 2609-2615

Hotspot-mediated non-dissipative and ultrafast plasmon passage

Authors: E.-M. Roller, L. V. Besteiro, C. Pupp, L. Khosravi Khorashad, A. O. Govorov, T. Liedl

Areas: 4, 5

Magazine: Nature Physics, 13, 761–765 (2017)

DNA Origami Seesaws as Comparative Binding Assay

Authors: Nickels, P. C., Høiberg, H. C., Simmel, S. S., Holzmeister, P., Tinnefeld, P., Liedl, T.

Areas: 4, 5

Magazine: Chembiochem. 2016 Jun 16;17(12):1093-6

doi: 10.1002/cbic.201600059

Tubulin Tyrosine Ligase-Mediated Modification of Proteins

Authors: Gerlach M, Stoschek T, Leonhardt H, Hackenberger CPR, Schumacher D and Helma J

Areas: 4, 5

Magazine: Methods Mol Biol., 2012, 327-355, 2019

BigStitcher: Reconstructing high-resolution image datasets of cleared and expanded samples

Authors: Hörl D, Rojas Rusak F, Preusser F, Tillberg P, Randel N, Chhetri RK, Cardona A, Keller PJ, Harz H, Leonhardt H, Treier M and Preibisch S

Areas: 4, 5

Magazine: Nature Methods, 16, 870-874

bioRxiv preprint first posted online Jun. 10, 2018

Can a flux-based mechanism explain positioning of protein clusters in three-dimensional cell geometry?

Authors: M Kober, S Bergeler, E Frey

Areas: 4

Magazine: Biophysical Journal (2019)

Reconstitution reveals how myosin VI self-organises to generate a dynamic mechanism of membrane sculpting

Authors: Rogez B, Würthner L, Petrova AB, Zierhut FB, Saczko-Brack D, Huergo MA, Batters C, Frey E, Veigel C

Areas: 4

Magazine: Nat Commun. 2019, 10(1):3305

doi: 10.1038/s41467-019-11268-9

Co-evolution of nodes and links: diversity driven coexistence in cyclic competition of three species

Authors: KE Bassler, E Frey, RKP Zia

Areas: 4

Magazine: Phys. Rev. E 99, 022309 (2019)

PAR protein activation-deactivation cycles stabilize long-axis polarization in C. elegans

Authors: R Geßele, J Halatek, E Frey

Areas: 4

Magazine: 

Delays in fitness adjustment can lead to coexistence of hierarchically interacting species

Authors: M Bauer, E Frey

Areas: 4

Magazine: Phys. Rev. Lett. 121 (26), 268101 (2018)

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