Publications supported by NIM 2018

Quantifying reversible surface binding via surface-integrated fluorescence correlation spectroscopy
Authors: J Mücksch, P Blumhardt, MT Strauss, EP Petrov, R Jungmann, P Schwille
Areas: 4
Magazine: Nano letters 18 (5), 3185-319212, 2018

Treadmilling analysis reveals new insights into dynamic FtsZ ring architecture
Authors: DA Ramirez-Diaz, DA García-Soriano, A Raso, J Mücksch, M Feingold, G Rivas, P Schwille
Areas: 4
Magazine: PLoS biology 16 (5), e200484523, 2018

Probing the interface structure of adhering cells by contrast variation neutron reflectometry
Authors: P. Böhm, A. Koutsioubas, J.-F. Moulin, J.O. Rädler, E. Sackmann, B. Nickel
Areas: 3, 4, 5
Magazine: Langmuir, 2019, 35, 2, 513-521

Nanostructures in n-Octanol Equilibrated with Additives and/or Water
Authors: G. Cevc, I. Berts, S. Fischer, J.O. Rädler, and B. Nickel
Areas: 3, 4, 5
Magazine: Langmuir 34, 6285 (2018)

Free Energy Landscape and Dynamics of Supercoiled DNA by High-Speed Atomic Force Microscopy
Authors: Tine Brouns, Herlinde De Keersmaecker, Sebastian Konrad, Noriyuki Kodera, Toshio Ando, Jan Lipfert*, Steven De Feyter*, Willem Vanderlinden*
Areas: 4
Magazine: ACS Nano 12:11907−11916 (2018)

Dynamics and Energy Landscape of DNA Plectoneme Nucleation
Authors: Philipp U. Walker, Willem Vanderlinden, and Jan Lipfert
Areas: 4
Magazine: Phys. Rev. E 0424121-13 (2018)

Quantifying the influence of the ion cloud on SAXS profiles of charged proteins
Authors: Miloš T. Ivanović, Linda K. Bruetzel, Roman Shevchuk, Jan Lipfert, and Jochen S. Hub
Areas: 4
Magazine: Phys. Chem. Chem. Phys., 20(41):26351-26361 (2018)

Gold Nanocrystal Labels Provide a Sequence-to-3D Structure Map in SAXS Reconstructions
Authors: Thomas Zettl, Rebecca S. Mathew, Xuesong Shi, Sebastian Doniach, Daniel Herschlag, Pehr A.B. Harbury, Jan Lipfert
Areas: 4
Magazine: Science Advances 4:eaar4418 (2018)

Recording and Analyzing Nucleic Acid Distance Distributions with X-ray Scattering Interferometry (XSI)
Authors: Thomas Zettl, Rhiju Das, Pehr A.B. Harbury*, Daniel Herschlag*, Jan Lipfert*, Rebecca S. Mathew, Xuesong Shi
Areas: 4
Magazine: Current Protocols e54 (2018)

Measuring Single-Molecule Twist and Torque in Multiplexed Magnetic Tweezers
Authors: Franziska Kriegel, Willem Vanderlinden, Thomas Nicolaus, Angelika Kardinal, and Jan Lipfert
Areas: 4
Magazine: Methods Mol. Biol. 1814:75-98 (2018)

Time-Resolved Small-Angle X-Ray Scattering Reveals Millisecond Transitions of a DNA Origami Switch
Authors: Linda K. Bruetzel, Philipp Walker, Thomas Gerling, Hendrik Dietz, and Jan Lipfert
Areas: 4
Magazine: Nano Letters 18:2672-2676 (2018)

Quantifying the Precision of Single-Molecule Torque and Twist Measurements Using Allan Variance
Authors: Maarten M. van Oene†, Seungkyu Ha†, Tessa Jager, Mina Lee, Francesco Pedaci, Jan Lipfert*, and Nynke H. Dekker*
Areas: 4
Magazine: Biophys. J. 114:1970–1979 (2018)

Temperature-dependent atomic models of detergent micelles refined against small-angle X-ray scattering data
Authors: Miloš T. Ivanović, Linda K. Bruetzel, Jan Lipfert*, and Jochen S. Hub*
Areas: 4
Magazine: Angewandte Chemie 57 (2018)

Structural architecture of the nucleosome remodeler ISWI determined from cross-linking, mass spectrometry, SAXS and modeling
Authors: Nadine Harrer†, Christina E.M. Schindler†, Linda K. Bruetzel, Ignasi Forné, Johanna Ludwigsen, Axel Imhof, Martin Zacharias, Jan Lipfert*, Felix Mueller-Planitz*
Areas: 4
Magazine: Structure 26:1-13 (2018)

DNA Origami Templated Silica Growth by Sol‐gel Chemistry
Authors: L. Nguyen, M. Döblinger, T. Liedl A. Heuer-Jungemann
Areas: 4, 5
Magazine: Angewandte Chemie International Edition, 58, 3, 2018

Circular Dichroism of Chiral Molecules in DNA-Assembled Plasmonic Hotspots
Authors: L. M. Kneer, E.-M. Roller, L. V. Besteiro, R. Schreiber, A. O. Govorov, T. Liedl
Areas: 4, 5
Magazine: ACS Nano, 2018, 12, 9, 9110-9115

3D DNA Origami Crystals
Authors: T. Zhang, C. Hartl, K. Frank, A. Heuer-Jungemann, S. Fischer, P. C. Nickels, B. Nickel, T. Liedl
Areas: 4, 5
Magazine: Advanced Materials, 30, 28, 2018

Position Accuracy of Gold Nanoparticles on DNA Origami Structures Studied with Small-Angle X-ray Scattering
Authors: C. Hartl, K. Frank, H. Amenitsch, S. Fischer, T. Liedl, B. Nickel
Areas: 4, 5
Magazine: Nano Lett, 2018, 18, 4, 2609-2615

BigStitcher: Reconstructing high-resolution image datasets of cleared and expanded samples
Authors: Hörl D, Rojas Rusak F, Preusser F, Tillberg P, Randel N, Chhetri RK, Cardona A, Keller PJ, Harz H, Leonhardt H, Treier M and Preibisch S
Areas: 4, 5
Magazine: Nature Methods, 16, 870-874
bioRxiv preprint first posted online Jun. 10, 2018

Delays in fitness adjustment can lead to coexistence of hierarchically interacting species
Authors: M Bauer, E Frey
Areas: 4
Magazine: Phys. Rev. Lett. 121 (26), 268101 (2018)
